Gene: SGA_v2.0_scaffold12G06003
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold12G06003
- Transcript Identifier SGA_v2.0_scaffold12T06003
- Gene Type Coding gene
- Location scaffold12 : 599915-606679 : negative
Gene Family Information
- ID HOM05D000122
- #Genes/#Species 2793/98
- Phylogenetic origin
- ID ORTHO05D000139
- #Genes/#Species 1726/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product cyclic nucleotide gated channel 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006816 | ISO | PLAZA Integrative Orthology | calcium ion transport | AT5G53130 |
GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT5G53130 |
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G15990 |
GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT1G15990 |
GO:0055085 | IEA | InterPro | transmembrane transport | |
GO:0006811 | IEA | InterPro | ion transport |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005221 | ISO | PLAZA Integrative Orthology | intracellular cyclic nucleotide activated cation channel activity | AT5G53130 |
GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT5G53130 |
GO:0005223 | ISO | PLAZA Integrative Orthology | intracellular cGMP-activated cation channel activity | AT2G23980 |
GO:0005216 | IEA | InterPro | ion channel activity | |
GO:0005242 | ISO | PLAZA Integrative Orthology | inward rectifier potassium channel activity | AT5G53130 |
GO:0005262 | ISO | PLAZA Integrative Orthology | calcium channel activity | AT4G30560 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0071944 | ISO | PLAZA Integrative Orthology | cell periphery | AT2G23980 |
GO:0090406 | ISO | PLAZA Integrative Orthology | pollen tube | AT1G15990 |
GO:0035618 | ISO | PLAZA Integrative Orthology | root hair | AT2G23980 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G53130 |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
24.3.2.4 | Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC) |