Gene: AT4G30560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G30560
  • Transcript Identifier AT4G30560.1
  • Gene Type Coding gene
  • Location Chr4 : 14926974-14929681 : negative

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G30560.1
  • symbol CNGC9
  • Alias ATCNGC9,cyclic nucleotide gated channel 9
  • uniprot F4JQC2

Descriptions

  • Description cyclic nucleotide gated channel 9
  • Computational description cyclic nucleotide gated channel 9 (CNGC9); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6 (TAIR:AT2G23980.1); Has 3647 Blast hits to 3476 proteins in 272 species: Archae - 0; Bacteria - 61; Metazoa - 1611; Fungi - 53; Plants - 1017; Viruses - 0; Other Eukaryotes - 905 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006811
IEA
GOA Databaseion transport
GO:0006811
IEA
InterProion transport
GO:0006813
IEA
GOA Databasepotassium ion transport
GO:0006813
IEA
InterPropotassium ion transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0071805
IEA
GOA Databasepotassium ion transmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030552
IEA
GOA DatabasecAMP binding
GO:0005216
IEA
GOA Databaseion channel activity
GO:0005216
IEA
InterProion channel activity
GO:0005249
IEA
Gene Ontologyvoltage-gated potassium channel activity
GO:0005249
IEA
InterProvoltage-gated potassium channel activity
GO:0030553
IEA
GOA DatabasecGMP binding
GO:0005262
IDA
Gene Ontologycalcium channel activity1
GO:0005516
IPI
TAS
Gene Ontologycalmodulin binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000595 Cyclic nucleotide-binding domain
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 Ion transport domain
IPR018490 Cyclic nucleotide-binding-like
IPR014710 RmlC-like jelly roll fold
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)