Gene: SEGI_37846
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_37846
- Transcript Identifier SEGI_37846.1
- Gene Type Coding gene
- Location chr9 : 224719206-224721962 : positive
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_37846.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G38000 |
| GO:0010067 | ISO | PLAZA Integrative Orthology | procambium histogenesis | AT5G62940 |
| GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT4G38000 |
| GO:0042545 | ISO | PLAZA Integrative Orthology | cell wall modification | AT3G50410 |
| GO:0003002 | ISO | PLAZA Integrative Orthology | regionalization | AT1G07640 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | AT1G07640 |
| GO:0009944 | ISO | PLAZA Integrative Orthology | polarity specification of adaxial/abaxial axis | AT5G02460 |
| GO:1902066 | ISO | PLAZA Integrative Orthology | regulation of cell wall pectin metabolic process | AT5G65590 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT3G55370 |
| GO:0010052 | ISO | PLAZA Integrative Orthology | guard cell differentiation | AT5G65590 |
| GO:0010497 | ISO | PLAZA Integrative Orthology | plasmodesmata-mediated intercellular transport | AT5G02460 |
| GO:0010118 | ISO | PLAZA Integrative Orthology | stomatal movement | AT5G65590 |
| GO:0010439 | ISO | PLAZA Integrative Orthology | regulation of glucosinolate biosynthetic process | AT1G07640 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT3G50410 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT3G50410 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G07640 |
| GO:0045787 | ISO | PLAZA Integrative Orthology | positive regulation of cell cycle | AT3G50410 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G07640 |
| GO:0090057 | ISO | PLAZA Integrative Orthology | root radial pattern formation | AT5G02460 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G62940 |
| GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT1G07640 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G38000 |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT3G50410 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G55370 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G65590 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G55370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G02460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |