Gene: SEGI_30086
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_30086
- Transcript Identifier SEGI_30086.1
- Gene Type Coding gene
- Location chr2 : 209213971-209232566 : negative
Gene Family Information
- ID HOM05D000484
- #Genes/#Species 1099/100
- Phylogenetic origin
- ID ORTHO05D000346
- #Genes/#Species 1078/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_30086.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048768 | ISO | PLAZA Integrative Orthology | root hair cell tip growth | AT2G26420 |
GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT1G77740 |
GO:0005975 | ISO | PLAZA Integrative Orthology | carbohydrate metabolic process | AT3G09920 |
GO:0006897 | ISO | PLAZA Integrative Orthology | endocytosis | AT3G56960 |
GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT2G41210 |
GO:0048766 | ISO | PLAZA Integrative Orthology | root hair initiation | AT2G26420 |
GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT2G26420 |
GO:0007164 | ISO | PLAZA Integrative Orthology | establishment of tissue polarity | AT3G56960 |
GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT2G41210 |
GO:2000114 | ISO | PLAZA Integrative Orthology | regulation of establishment of cell polarity | AT2G26420 |
GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT1G77740 |
GO:0010118 | ISO | PLAZA Integrative Orthology | stomatal movement | AT3G56960 |
GO:0009827 | ISO | PLAZA Integrative Orthology | plant-type cell wall modification | AT2G41210 |
GO:0003006 | ISO | PLAZA Integrative Orthology | developmental process involved in reproduction | AT1G77740 |
GO:0072583 | ISO | PLAZA Integrative Orthology | clathrin-dependent endocytosis | AT3G07960 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc09g008480.4 |
GO:0046854 | ISO | PLAZA Integrative Orthology | phosphatidylinositol phosphate biosynthetic process | AT1G21980 |
GO:0006520 | ISO | PLAZA Integrative Orthology | cellular amino acid metabolic process | AT3G09920 |
GO:0046488 | IEA | InterPro | phosphatidylinositol metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G09920 |
GO:0051015 | ISO | PLAZA Integrative Orthology | actin filament binding | AT1G21980 |
GO:0003785 | ISO | PLAZA Integrative Orthology | actin monomer binding | AT1G21980 |
GO:0016307 | IEA | InterPro | phosphatidylinositol phosphate kinase activity | |
GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D000484 |
GO:0016308 | ISO | PLAZA Integrative Orthology | 1-phosphatidylinositol-4-phosphate 5-kinase activity | AT1G21980 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0090406 | ISO | PLAZA Integrative Orthology | pollen tube | AT3G07960 |
GO:0016324 | ISO | PLAZA Integrative Orthology | apical plasma membrane | AT3G07960 |
GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT3G09920 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G26420 |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G09920 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G21980 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G09920 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
27.5.1.4.3 | Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 4-phosphate 5-kinase (PIP5K) |