Gene: SEGI_28728
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_28728
- Transcript Identifier SEGI_28728.1
- Gene Type Coding gene
- Location chr2 : 861575200-861590113 : negative
Gene Family Information
- ID HOM05D001027
- #Genes/#Species 591/99
- Phylogenetic origin
- ID ORTHO05D000844
- #Genes/#Species 587/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_28728.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | ISO | PLAZA Homology (enrichment) | nucleosome assembly | HOM05D001027 |
| GO:0006357 | ISO | PLAZA Integrative Orthology | regulation of transcription by RNA polymerase II | AT1G49950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003691 | IEA | InterPro | double-stranded telomeric DNA binding | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G67580 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G67580 |
| GO:0043047 | ISO | PLAZA Integrative Orthology | single-stranded telomeric DNA binding | Zm00001eb357490 |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D001027 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G67580 |
| GO:1990841 | ISO | PLAZA Integrative Orthology | promoter-specific chromatin binding | AT1G49950 |
| GO:0042162 | ISO | PLAZA Integrative Orthology | telomeric DNA binding | AT5G67580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G67580 |
| GO:0000786 | ISO | PLAZA Homology (enrichment) | nucleosome | HOM05D001027 |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT5G67580 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G67580 |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT1G49950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |