Gene: SEGI_21248
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_21248
- Transcript Identifier SEGI_21248.1
- Gene Type Coding gene
- Location chr1 : 945172641-945178293 : negative
Gene Family Information
- ID HOM05D000026
- #Genes/#Species 5778/100
- Phylogenetic origin
- ID ORTHO05D000094
- #Genes/#Species 2188/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_21248.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT5G03350 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT3G15356 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT3G16530 |
| GO:0071323 | ISO | PLAZA Integrative Orthology | cellular response to chitin | AT3G15356 |
| GO:0071369 | ISO | PLAZA Integrative Orthology | cellular response to ethylene stimulus | AT3G15356 |
| GO:0071446 | ISO | PLAZA Integrative Orthology | cellular response to salicylic acid stimulus | AT5G03350 |
| GO:0002239 | ISO | PLAZA Integrative Orthology | response to oomycetes | AT3G16530 |
| GO:0009627 | ISO | PLAZA Integrative Orthology | systemic acquired resistance | AT5G03350 |
| GO:0071395 | ISO | PLAZA Integrative Orthology | cellular response to jasmonic acid stimulus | AT3G15356 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT3G15356 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT1G53070 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | InterPro | protein kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G53070 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT3G16530 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT1G53070 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G16530 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G03350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044730 | Ribonuclease H-like domain, plant type |
| IPR001220 | Legume lectin domain |
| IPR000719 | Protein kinase domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 18.4.1.19 | Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (L-lectin) |