Gene: SEGI_05774
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_05774
- Transcript Identifier SEGI_05774.1
- Gene Type Coding gene
- Location chr8 : 205244406-205266421 : negative
Gene Family Information
- ID HOM05D000194
- #Genes/#Species 2004/96
- Phylogenetic origin
- ID ORTHO05D000069
- #Genes/#Species 2544/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid SEGI_05774.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006351 | ISO | PLAZA Integrative Orthology | transcription, DNA-templated | AT4G34530 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT4G34530 |
| GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT4G34530 |
| GO:0045824 | ISO | PLAZA Integrative Orthology | negative regulation of innate immune response | AT4G34530 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT4G34530 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT4G34530 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G34530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G34530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| IPR024097 | Basic helix-loop-helix leucine zipper transcription factor |
| IPR002156 | Ribonuclease H domain |
| IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |
| 26.1.2.1.2 | External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB) |