Gene: RcHm_v2.0_Chr6g0304851

General Information

Structural Information

  • Species Rosa chinensis
  • Gene Identifier RcHm_v2.0_Chr6g0304851
  • Transcript Identifier RcHm_v2.0_Chr6g0304851
  • Gene Type Coding gene
  • Location RcHm_v2.0_Chr6 : 64000524-64005565 : positive

Gene Family Information

  • ID HOM05D000280
  • #Genes/#Species 1564/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070481
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, non-stop decay AT5G10630
GO:0006414
ISO
PLAZA Homology (enrichment)translational elongation HOM05D000280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G10630
GO:0003746
ISO
PLAZA Homology (enrichment)translation elongation factor activity HOM05D000280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000795 Translational (tr)-type GTP-binding domain
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR036443 Zinc finger, RanBP2-type superfamily
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Mapman id Description
16.4.1.2.6.4 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.associated EXO9 interaction GTPase (SKI7)
17.3.3.1.2 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.GTPase component HBS1/SPL33/SKI7