Gene: Pp3c8_11630

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_11630
  • Transcript Identifier Pp3c8_11630V3.2
  • Gene Type Coding gene
  • Location Chr08 : 7496177-7499796 : positive

Gene Family Information

  • ID HOM05D000327
  • #Genes/#Species 1418/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_11630V3.2
  • pacid 32965486
  • alias Phpat.008G038600
  • alias Phypa_17898
  • alias Pp1s62_86V6
  • uniprot A0A2K1K6U8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G43750
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
GOA DatabaseRNA-DNA hybrid ribonuclease activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G43750
GO:0005737
IBA
GOA Databasecytoplasm
GO:0000151
IBA
GOA Databaseubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR002156 Ribonuclease H domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR002867 IBR domain
IPR001841 Zinc finger, RING-type
IPR031127 E3 ubiquitin ligase RBR family
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)