Gene: Pp3c6_5280
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c6_5280
- Transcript Identifier Pp3c6_5280V3.2
- Gene Type Coding gene
- Location Chr06 : 3063253-3066935 : negative
Gene Family Information
- ID HOM05D002871
- #Genes/#Species 241/96
- Phylogenetic origin
- ID ORTHO05D003307
- #Genes/#Species 231/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c6_5280V3.2
- pacid 32978030
- alias Phypa_219750
- alias Phpat.006G018400
- alias Pp1s180_129V6
- uniprot A9T7U1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006084 | IBA IEA | GOA Database | acetyl-CoA metabolic process | |
GO:0006084 | IEA | InterPro | acetyl-CoA metabolic process | |
GO:0019287 | ISO | PLAZA Integrative Orthology | isopentenyl diphosphate biosynthetic process, mevalonate pathway | AT4G11820 |
GO:0010142 | IBA IEA | GOA Database | farnesyl diphosphate biosynthetic process, mevalonate pathway | |
GO:0010142 | IEA | InterPro | farnesyl diphosphate biosynthetic process, mevalonate pathway | |
GO:0008299 | IEA | GOA Database | isoprenoid biosynthetic process | |
GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
GO:0016126 | IEA | GOA Database | sterol biosynthetic process | |
GO:0008202 | IEA | GOA Database | steroid metabolic process | |
GO:0006694 | IEA | GOA Database | steroid biosynthetic process | |
GO:0006629 | IEA | GOA Database | lipid metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003985 | ISO | PLAZA Integrative Orthology | acetyl-CoA C-acetyltransferase activity | AT4G11820 |
GO:0004421 | IBA IEA | GOA Database | hydroxymethylglutaryl-CoA synthase activity | |
GO:0004421 | IEA | InterPro | hydroxymethylglutaryl-CoA synthase activity | |
GO:0016746 | IEA | GOA Database | acyltransferase activity | |
GO:0016746 | IEA | InterPro | acyltransferase activity | |
GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G11820 |
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G11820 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
9.1.1.2 | Secondary metabolism.terpenoids.mevalonate pathway.3-hydroxy-3-methylglutaryl-CoA synthase |