Gene: Pp3c6_2600

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_2600
  • Transcript Identifier Pp3c6_2600V3.1
  • Gene Type Coding gene
  • Location Chr06 : 1402366-1409975 : negative

Gene Family Information

  • ID HOM05D001331
  • #Genes/#Species 472/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_2600V3.1
  • pacid 32978831
  • alias Phpat.006G009100
  • uniprot A0A2K1KE70

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G16270
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT5G40840
GO:0070601
ISO
PLAZA Integrative Orthologycentromeric sister chromatid cohesion AT5G16270
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G59550
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT3G59550
GO:0007130
IBA
GOA Databasesynaptonemal complex assembly
GO:0007064
IBA
GOA Databasemitotic sister chromatid cohesion
GO:0007062
IEA
GOA Databasesister chromatid cohesion
GO:0007062
IEA
InterProsister chromatid cohesion
GO:1990414
IBA
GOA Databasereplication-born double-strand break repair via sister chromatid exchange
GO:0007049
IEA
GOA Databasecell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IBA
GOA Databasechromatin binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G59550
GO:0000795
IBA
GOA Databasesynaptonemal complex
GO:0034990
IBA
GOA Databasenuclear mitotic cohesin complex
GO:0034991
IBA
GOA Databasenuclear meiotic cohesin complex
GO:0008278
IEA
GOA Databasecohesin complex
GO:0008278
IEA
InterProcohesin complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039781 Rad21/Rec8-like protein
IPR006909 Rad21/Rec8-like protein, C-terminal, eukaryotic
IPR036390 Winged helix DNA-binding domain superfamily
IPR006910 Rad21/Rec8-like protein, N-terminal
IPR023093 ScpA-like, C-terminal
Mapman id Description
13.3.4.1.3 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.mitotic-specific Kleisin-type component SCC1