Gene: Pp3c6_17870

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_17870
  • Transcript Identifier Pp3c6_17870V3.2
  • Gene Type Coding gene
  • Location Chr06 : 11468169-11469878 : negative

Gene Family Information

  • ID HOM05D002845
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_17870V3.2
  • pacid 32975356
  • alias Pp1s14_43V6
  • alias Phpat.006G065000
  • alias Phypa_203246
  • uniprot A0A2K1KG41

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0034657
IBA
GOA DatabaseGID complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR045098 Fyv10 family
IPR013144 CRA domain
IPR006594 LIS1 homology motif
IPR037683 Rmd5, degenerated RING (dRING) finger
IPR024964 CTLH/CRA C-terminal to LisH motif domain
IPR027370 RING-type zinc-finger, LisH dimerisation motif
Mapman id Description
19.2.1.3.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2