Gene: Pp3c5_9420

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_9420
  • Transcript Identifier Pp3c5_9420V3.1
  • Gene Type Coding gene
  • Location Chr05 : 6929166-6933413 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_9420V3.1
  • pacid 32953740
  • alias Phpat.005G035200
  • alias Phypa_127229
  • alias Pp1s64_138V6
  • uniprot A0A2K1KJ24

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT5G62000
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G62000
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT5G62000
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G62000
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G62000
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc03g118290.3
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G59750
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development Solyc03g118290.3
GO:0009835
ISO
PLAZA Integrative Orthologyfruit ripening Solyc03g118290.3
GO:1903288
ISO
PLAZA Integrative Orthologypositive regulation of potassium ion import across plasma membrane AT5G62000
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT5G62000
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G62000
GO:0009725
IEA
GOA Databaseresponse to hormone
GO:0009725
IEA
InterProresponse to hormone
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61830
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity Solyc03g118290.3
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61830
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G62000
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G62000
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Solyc03g118290.3
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G61830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G46530
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033389 AUX/IAA domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR010525 Auxin response factor domain
IPR044835 Auxin response factor
IPR003340 B3 DNA binding domain
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)