Gene: Pp3c5_22190
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c5_22190
- Transcript Identifier Pp3c5_22190V3.3
- Gene Type Coding gene
- Location Chr05 : 15398352-15400647 : positive
Gene Family Information
- ID HOM05D000404
- #Genes/#Species 1248/99
- Phylogenetic origin
- ID ORTHO05D001765
- #Genes/#Species 358/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c5_22190V3.3
- pacid 32954151
- alias Phpat.005G081800
- alias Pp1s23_21V6
- alias Phypa_118142
- uniprot A0A2K1KKM8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000272 | IEA | GOA Database | polysaccharide catabolic process | |
| GO:0000272 | IEA | InterPro | polysaccharide catabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT4G17090 |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | Solyc09g091030.3 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc09g091030.3 |
| GO:0000024 | ISO | PLAZA Integrative Orthology | maltose biosynthetic process | AT4G17090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016161 | IEA | GOA Database | beta-amylase activity | |
| GO:0016161 | IEA | InterPro | beta-amylase activity | |
| GO:0102229 | IEA | GOA Database | amylopectin maltohydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G17090 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G23920 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G23920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.2.3.3.1.2 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase |