Gene: Pp3c5_15220
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c5_15220
- Transcript Identifier Pp3c5_15220V3.1
- Gene Type Coding gene
- Location Chr05 : 10723769-10727518 : negative
Gene Family Information
- ID HOM05D003757
- #Genes/#Species 183/99
- Phylogenetic origin
- ID ORTHO05D004892
- #Genes/#Species 168/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c5_15220V3.1
- pacid 32955798
- alias Phypa_107528
- alias Pp1s169_104V6
- alias Phpat.005G057100
- uniprot A9T5P0
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0006383 | IEA | GOA Database | transcription by RNA polymerase III | |
| GO:0006360 | IEA | GOA Database | transcription by RNA polymerase I |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0001054 | IBA IEA | GOA Database | RNA polymerase I activity | |
| GO:0001054 | IEA | InterPro | RNA polymerase I activity | |
| GO:0001056 | IBA IEA | GOA Database | RNA polymerase III activity | |
| GO:0001056 | IEA | InterPro | RNA polymerase III activity | |
| GO:0003899 | IBA IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G60850 |
| GO:0005666 | IBA | GOA Database | RNA polymerase III complex | |
| GO:0005736 | IBA | GOA Database | RNA polymerase I complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011262 | DNA-directed RNA polymerase, insert domain |
| IPR036643 | DNA-directed RNA polymerase, insert domain superfamily |
| IPR033901 | DNA-directed RNA polymerases I and III subunit AC40 |
| IPR036603 | RNA polymerase, RBP11-like subunit |
| IPR011263 | DNA-directed RNA polymerase, RpoA/D/Rpb3-type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |