Gene: Pp3c4_850
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c4_850
- Transcript Identifier Pp3c4_850V3.2
- Gene Type Coding gene
- Location Chr04 : 476317-477468 : positive
Gene Family Information
- ID HOM05D000715
- #Genes/#Species 808/100
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c4_850V3.2
- pacid 32920355
- alias Pp1s267_24V6
- alias Phpat.004G002400
- alias Phypa_38844
- uniprot A0A2K1KLP5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT3G50410 |
| GO:0042545 | ISO | PLAZA Integrative Orthology | cell wall modification | AT3G50410 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G51700 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT3G50410 |
| GO:0045787 | ISO | PLAZA Integrative Orthology | positive regulation of cell cycle | AT3G50410 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G21040 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50410 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT4G21040 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | Zm00001eb033670 |
| GO:0003677 | IBA IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | Zm00001eb033670 |
| GO:0003700 | IBA | GOA Database | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Zm00001eb033670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |