Gene: Pp3c4_2590

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c4_2590
  • Transcript Identifier Pp3c4_2590V3.2
  • Gene Type Coding gene
  • Location Chr04 : 1629762-1633702 : negative

Gene Family Information

  • ID HOM05D001414
  • #Genes/#Species 444/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c4_2590V3.2
  • pacid 32921922
  • alias Pp1s160_6V6
  • alias Phpat.004G009200
  • alias Phypa_167881
  • uniprot A0A2K1KLY0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G37260
GO:0010600
ISO
PLAZA Integrative Orthologyregulation of auxin biosynthetic process AT5G17300
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT3G09600
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT5G37260
GO:0032922
ISO
PLAZA Integrative Orthologycircadian regulation of gene expression AT3G09600
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT3G09600
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc02g036370.3
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G17300
GO:0042753
ISO
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT3G09600
GO:0045944
ISO
PLAZA Integrative Orthologypositive regulation of transcription by RNA polymerase II AT3G09600
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT5G02840
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G02840
GO:0009851
ISO
PLAZA Integrative Orthologyauxin biosynthetic process AT5G17300
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G10113
GO:0043966
ISO
PLAZA Integrative Orthologyhistone H3 acetylation AT3G09600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G37260
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G17300
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G09600
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G02840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR006447 Myb domain, plants
IPR001005 SANT/Myb domain
Mapman id Description
15.5.2.4 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (REVEILLE)
27.1.6.2 Multi-process regulation.circadian clock system.evening element regulation.clock factor (REVEILLE)