Gene: Pp3c4_20430
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c4_20430
- Transcript Identifier Pp3c4_20430V3.1
- Gene Type Coding gene
- Location Chr04 : 13813528-13814924 : positive
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000063
- #Genes/#Species 2631/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c4_20430V3.1
- pacid 32920934
- alias Phpat.004G078500
- alias Pp1s201_58V6
- alias Phypa_143409
- uniprot X5IHC2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003002 | ISO | PLAZA Integrative Orthology | regionalization | AT1G79580 |
| GO:0010047 | ISO | PLAZA Integrative Orthology | fruit dehiscence | AT2G46770 |
| GO:0010455 | ISO | PLAZA Integrative Orthology | positive regulation of cell fate commitment | AT1G79580 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT4G10350 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G46770 |
| GO:0009809 | ISO | PLAZA Integrative Orthology | lignin biosynthetic process | AT2G46770 |
| GO:0048759 | ISO | PLAZA Integrative Orthology | xylem vessel member cell differentiation | AT4G36160 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT2G46770 |
| GO:1901348 | ISO | PLAZA Integrative Orthology | positive regulation of secondary cell wall biogenesis | AT4G36160 |
| GO:0009901 | ISO | PLAZA Integrative Orthology | anther dehiscence | AT2G46770 |
| GO:0048829 | ISO | PLAZA Integrative Orthology | root cap development | AT1G79580 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G36160 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G36160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G36160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |