Gene: AT2G46770
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G46770
- Transcript Identifier AT2G46770.1
- Gene Type Coding gene
- Location Chr2 : 19220917-19222822 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000063
- #Genes/#Species 2631/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G46770.1
- symbol NST1
- Alias ANAC043,Arabidopsis NAC domain containing protein 43
- full_name NAC SECONDARY WALL THICKENING PROMOTING FACTOR1
- uniprot Q84WP6
Descriptions
- Description NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
- Computational description EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | NAS | Gene Ontology | embryo development ending in seed dormancy | |
| GO:0009834 | IDA, IMP, IGI | Gene Ontology | plant-type secondary cell wall biogenesis | 1 2 3 |
| GO:0009901 | IGI | Gene Ontology | anther dehiscence | 1 |
| GO:0009809 | IGI | Gene Ontology | lignin biosynthetic process | 2 |
| GO:0010047 | IMP | Gene Ontology | fruit dehiscence | 4 |
| GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 5 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 6 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |