Gene: Pp3c4_20250

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c4_20250
  • Transcript Identifier Pp3c4_20250V3.2
  • Gene Type Coding gene
  • Location Chr04 : 13677377-13678055 : positive

Gene Family Information

  • ID HOM05D000437
  • #Genes/#Species 1181/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c4_20250V3.2
  • pacid 32922003
  • alias Pp1s201_81V6
  • alias Phpat.004G077400
  • alias Phypa_59905
  • uniprot A9TC10

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IBA
GOA Databasenucleosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G45980
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G07790
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G46030
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G45980
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G02570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR000558 Histone H2B
IPR007125 Histone H2A/H2B/H3
Mapman id Description
12.1.1.2 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2B)