Gene: Pp3c3_37980

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_37980
  • Transcript Identifier Pp3c3_37980V3.1
  • Gene Type Coding gene
  • Location Chr03 : 25403640-25406206 : negative

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_37980V3.1
  • pacid 32940701
  • alias Pp1s96_224V6
  • alias Phpat.003G149600
  • alias Phypa_81614
  • uniprot A9SN31

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001676
IEA
GOA Databaselong-chain fatty acid metabolic process
GO:0046949
IBA
GOA Databasefatty-acyl-CoA biosynthetic process
GO:0080110
ISO
PLAZA Integrative Orthologysporopollenin biosynthetic process AT1G62940
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G62940
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT1G62940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004467
IBA
GOA Databaselong-chain fatty acid-CoA ligase activity
GO:0016405
IBA
GOA DatabaseCoA-ligase activity
GO:0031956
ISO
PLAZA Integrative Orthologymedium-chain fatty acid-CoA ligase activity AT1G62940
GO:0016207
ISO
PLAZA Integrative Orthology4-coumarate-CoA ligase activity AT1G62940
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G62940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G62940
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G62940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025110 AMP-binding enzyme, C-terminal domain
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
Mapman id Description
21.8.1.3 Cell wall organisation.sporopollenin.biosynthesis.acyl-CoA synthetase (ACS5)