Gene: AT1G62940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G62940
- Transcript Identifier AT1G62940.1
- Gene Type Coding gene
- Location Chr1 : 23310554-23312747 : positive
Gene Family Information
- ID HOM05D000169
- #Genes/#Species 2209/100
- Phylogenetic origin
- ID ORTHO05D008642
- #Genes/#Species 116/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G62940.1
- symbol ACOS5
- uniprot Q9LQ12
Descriptions
- Description acyl-CoA synthetase 5
- Computational description acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001676 | IEA | GOA Database | long-chain fatty acid metabolic process | |
| GO:0046949 | IDA IBA | Gene Ontology | fatty-acyl-CoA biosynthetic process | 1 2 |
| GO:0009555 | IMP | Gene Ontology | pollen development | 3 |
| GO:0080110 | IMP TAS | Gene Ontology | sporopollenin biosynthetic process | 1 |
| GO:0010584 | IMP | Gene Ontology | pollen exine formation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0004467 | IDA IBA | Gene Ontology | long-chain fatty acid-CoA ligase activity | 1 2 |
| GO:0016405 | IBA | Gene Ontology | CoA-ligase activity | 2 |
| GO:0031956 | IDA | Gene Ontology | medium-chain fatty acid-CoA ligase activity | 1 |
| GO:0016207 | IDA ISS | Gene Ontology | 4-coumarate-CoA ligase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IDA | Gene Ontology | endoplasmic reticulum | 4 |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.8.1.3 | Cell wall organisation.sporopollenin.biosynthesis.acyl-CoA synthetase (ACS5) |