Gene: Pp3c3_26340
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_26340
- Transcript Identifier Pp3c3_26340V3.1
- Gene Type Coding gene
- Location Chr03 : 18021882-18023557 : positive
Gene Family Information
- ID HOM05D000289
- #Genes/#Species 1528/99
- Phylogenetic origin
- ID ORTHO05D000208
- #Genes/#Species 1386/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c3_26340V3.1
- pacid 32940795
- alias Pp1s351_49V6
- alias Phypa_151993
- alias Phpat.003G103800
- uniprot A0A2K1KW69
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071786 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum tubular network organization | AT5G41600 |
| GO:0009617 | IEA | GOA Database | response to bacterium | |
| GO:0009617 | IEA | InterPro | response to bacterium | |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT2G46170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G11220 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G61560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G23630 |
| GO:0071458 | ISO | PLAZA Integrative Orthology | integral component of cytoplasmic side of endoplasmic reticulum membrane | AT5G41600 |
| GO:0071782 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum tubular network | AT5G41600 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10260 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G61560 |
| GO:0005788 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum lumen | AT3G61560 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G61560 |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT3G61560 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G11220 |
| GO:0009510 | ISO | PLAZA Integrative Orthology | plasmodesmatal desmotubule | AT3G61560 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.5.1 | Cell cycle organisation.cytokinesis.endoplasmic reticulum (ER) reorganisation.ER-associated protein (Reticulon) |