Gene: AT3G61560
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G61560
- Transcript Identifier AT3G61560.1
- Gene Type Coding gene
- Location Chr3 : 22777918-22779171 : positive
Gene Family Information
- ID HOM05D000289
- #Genes/#Species 1528/99
- Phylogenetic origin
- ID ORTHO05D000208
- #Genes/#Species 1386/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G61560.1
- uniprot Q6DBN4
Descriptions
- Description Reticulon family protein
- Computational description Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 1228 Blast hits to 1226 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 693; Fungi - 4; Plants - 505; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009617 | IEA | Gene Ontology | response to bacterium | |
| GO:0009617 | IEA | InterPro | response to bacterium |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IDA IEA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 2 |
| GO:0009506 | IDA, HDA | Gene Ontology | plasmodesma | 1 3 |
| GO:0005788 | IDA | Gene Ontology | endoplasmic reticulum lumen | 1 |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005789 | IDA | Gene Ontology | endoplasmic reticulum membrane | 1 |
| GO:0009504 | IDA | Gene Ontology | cell plate | 1 |
| GO:0009510 | IDA | Gene Ontology | plasmodesmatal desmotubule | 1 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.5.1 | Cell cycle organisation.cytokinesis.endoplasmic reticulum (ER) reorganisation.ER-associated protein (Reticulon) |