Gene: Pp3c3_22150

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_22150
  • Transcript Identifier Pp3c3_22150V3.3
  • Gene Type Coding gene
  • Location Chr03 : 15188647-15189252 : negative

Gene Family Information

  • ID HOM05D000221
  • #Genes/#Species 1858/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_22150V3.3
  • pacid 32942360
  • alias Phypa_162789
  • alias Pp1s47_181V6
  • alias Phpat.003G087100
  • uniprot A9S4I9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006342
IBA
GOA Databasechromatin silencing
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G54640
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT5G54640
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G54640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G51060
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G51060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002119 Histone H2A
IPR009072 Histone-fold
IPR007125 Histone H2A/H2B/H3
IPR032454 Histone H2A, C-terminal domain
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)