Gene: Pp3c3_21160

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_21160
  • Transcript Identifier Pp3c3_21160V3.2
  • Gene Type Coding gene
  • Location Chr03 : 14616117-14616947 : positive

Gene Family Information

  • ID HOM05D000723
  • #Genes/#Species 800/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_21160V3.2
  • pacid 32944080
  • alias Phypa_48360
  • alias Pp1s47_274V6
  • alias Phpat.003G083100
  • uniprot A0A2K1KVH8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G55280
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G55280
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G55280
GO:0000027
IBA
GOA Databaseribosomal large subunit assembly
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G55280
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G55280
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G39460
GO:0015934
ISO
PLAZA Integrative Orthologylarge ribosomal subunit AT2G39460
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G39460
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G39460
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G55280
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G39460
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012678 Ribosomal protein L23/L15e core domain superfamily
IPR019985 Ribosomal protein L23
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR013025 Ribosomal protein L25/L23
IPR005633 Ribosomal protein L23/L25, N-terminal
Mapman id Description
17.1.2.1.24 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL23a