Gene: Pp3c2_28870

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c2_28870
Transcript Identifier Pp3c2_28870V3.1
Gene Type Coding gene
Location Chr02 : 19476006-19477354 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001088
#Genes/#Species 563/99
Phylogenetic origin

ID ORTHO05D003028
#Genes/#Species 247/82
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

name Pp3c2_28870V3.1
pacid 32935260
alias Phpat.002G117500
alias Pp1s22_171V6
alias Phypa_118030
uniprot A9RQD4

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006412	IEA	GOA Database	translation
GO:0006412	IEA	InterPro	translation
GO:0006914	ISO	PLAZA Homology (enrichment)	autophagy	HOM05D001088
GO:0048208	ISO	PLAZA Homology (enrichment)	COPII vesicle coating	HOM05D001088

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003735	IEA	GOA Database	structural constituent of ribosome
GO:0003735	IEA	InterPro	structural constituent of ribosome
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G19750

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005840	IEA	GOA Database	ribosome
GO:0005840	IEA	InterPro	ribosome
GO:0022627	ISO	PLAZA Integrative Orthology	cytosolic small ribosomal subunit	AT5G56670
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT5G56670

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006846	Ribosomal protein S30

Mapman id	Description
17.1.3.1.32	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS30