Gene: Pp3c2_20240
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c2_20240
- Transcript Identifier Pp3c2_20240V3.6
- Gene Type Coding gene
- Location Chr02 : 13030330-13032589 : negative
Gene Family Information
- ID HOM05D000179
- #Genes/#Species 2119/97
- Phylogenetic origin
- ID ORTHO05D000107
- #Genes/#Species 2044/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c2_20240V3.6
- pacid 32937547
- alias Pp1s165_3V6
- alias Phpat.002G087100
- uniprot A0A2K1L2D8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT5G03150 |
| GO:0034504 | ISO | PLAZA Integrative Orthology | protein localization to nucleus | AT5G44160 |
| GO:0010431 | ISO | PLAZA Integrative Orthology | seed maturation | AT5G66730 |
| GO:0010029 | ISO | PLAZA Integrative Orthology | regulation of seed germination | AT5G66730 |
| GO:0010336 | ISO | PLAZA Integrative Orthology | gibberellic acid homeostasis | AT3G50700 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | Os10g0419200 |
| GO:0009939 | ISO | PLAZA Integrative Orthology | positive regulation of gibberellic acid mediated signaling pathway | AT1G03840 |
| GO:0048575 | ISO | PLAZA Integrative Orthology | short-day photoperiodism, flowering | Os10g0419200 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT5G44160 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G44160 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009937 | ISO | PLAZA Integrative Orthology | regulation of gibberellic acid mediated signaling pathway | AT3G50700 |
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT5G44160 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G14580 |
| GO:0045604 | ISO | PLAZA Integrative Orthology | regulation of epidermal cell differentiation | AT5G03150 |
| GO:0008356 | ISO | PLAZA Integrative Orthology | asymmetric cell division | AT1G14580 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT5G44160 |
| GO:0010075 | ISO | PLAZA Integrative Orthology | regulation of meristem growth | AT5G44160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019900 | ISO | PLAZA Integrative Orthology | kinase binding | AT5G44160 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44160 |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT5G03150 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G03840 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G14580 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G03150 |
| GO:0003700 | IBA | GOA Database | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |