Gene: Pp3c26_12230
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c26_12230
- Transcript Identifier Pp3c26_12230V3.1
- Gene Type Coding gene
- Location Chr26 : 7672677-7674426 : positive
Gene Family Information
- ID HOM05D000133
- #Genes/#Species 2666/99
- Phylogenetic origin
- ID ORTHO05D000259
- #Genes/#Species 1252/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c26_12230V3.1
- pacid 32916998
- alias Phypa_52281
- alias Pp1s6_313V6
- alias Phpat.026G043300
- uniprot A0A2K1ICT3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010207 | ISO | PLAZA Integrative Orthology | photosystem II assembly | AT4G10340 |
| GO:0010196 | ISO | PLAZA Integrative Orthology | nonphotochemical quenching | AT4G10340 |
| GO:0009768 | IBA | GOA Database | photosynthesis, light harvesting in photosystem I | |
| GO:0009416 | IBA | GOA Database | response to light stimulus | |
| GO:0009765 | IEA | GOA Database | photosynthesis, light harvesting | |
| GO:0009765 | IEA | InterPro | photosynthesis, light harvesting | |
| GO:0018298 | IEA | GOA Database | protein-chromophore linkage | |
| GO:0015979 | IEA | GOA Database | photosynthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G10340 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G10340 |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT4G10340 |
| GO:0016168 | IEA | GOA Database | chlorophyll binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010287 | IBA | GOA Database | plastoglobule | |
| GO:0042651 | ISO | PLAZA Integrative Orthology | thylakoid membrane | AT4G10340 |
| GO:0009533 | ISO | PLAZA Integrative Orthology | chloroplast stromal thylakoid | AT4G10340 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT4G10340 |
| GO:0009783 | ISO | PLAZA Integrative Orthology | photosystem II antenna complex | AT4G10340 |
| GO:0009517 | ISO | PLAZA Integrative Orthology | PSII associated light-harvesting complex II | AT4G10340 |
| GO:0009535 | IBA IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0009579 | IEA | GOA Database | thylakoid | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009522 | IEA | GOA Database | photosystem I | |
| GO:0009523 | IEA | GOA Database | photosystem II |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.1.3 | Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb5 |