Gene: Pp3c23_18300

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_18300
  • Transcript Identifier Pp3c23_18300V3.2
  • Gene Type Coding gene
  • Location Chr23 : 12086446-12090527 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_18300V3.2
  • pacid 32951172
  • alias Phypa_162963
  • alias Phpat.023G065100
  • alias Pp1s49_256V6
  • uniprot A9S5I6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G53750
GO:0045899
IBA
GOA Databasepositive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0030163
IEA
GOA Databaseprotein catabolic process
GO:0030163
IEA
InterProprotein catabolic process
GO:1901800
IEA
GOA Databasepositive regulation of proteasomal protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036402
IEA
GOA Databaseproteasome-activating activity
GO:0036402
IEA
InterProproteasome-activating activity
GO:0017025
IBA
GOA DatabaseTBP-class protein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G53750
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53750
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G53750
GO:0008540
IBA
GOA Databaseproteasome regulatory particle, base subcomplex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0000502
IEA
GOA Databaseproteasome complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005937 26S proteasome regulatory subunit P45-like
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
Mapman id Description
19.2.5.2.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT1