Gene: Pp3c22_9250

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c22_9250
  • Transcript Identifier Pp3c22_9250V3.1
  • Gene Type Coding gene
  • Location Chr22 : 5712606-5714829 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c22_9250V3.1
  • pacid 32903076
  • alias Pp1s12_41V6
  • alias Phypa_202798
  • alias Phpat.022G035000
  • uniprot A0A2K1IMW0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G11660
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT2G41690
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G11660
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G62020
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41690
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)