Gene: AT4G11660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G11660
  • Transcript Identifier AT4G11660.1
  • Gene Type Coding gene
  • Location Chr4 : 7043006-7044227 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G11660.1
  • symbol AT-HSFB2B
  • uniprot Q9T0D3

Descriptions

  • Description winged-helix DNA-binding transcription factor family protein
  • Computational description AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0071456
HEP
Gene Ontologycellular response to hypoxia2
GO:0045892
IDA
Gene Ontologynegative regulation of transcription, DNA-templated3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)