Gene: Pp3c21_10320

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c21_10320
  • Transcript Identifier Pp3c21_10320V3.1
  • Gene Type Coding gene
  • Location Chr21 : 6657065-6661043 : negative

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c21_10320V3.1
  • pacid 32916672
  • alias Pp1s235_27V6
  • alias Phypa_145866
  • uniprot A0A2K1IRF4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G23380
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated Os03g0727000
GO:0010930
ISO
PLAZA Integrative Orthologynegative regulation of auxin mediated signaling pathway Os03g0727000
GO:0010497
ISO
PLAZA Integrative Orthologyplasmodesmata-mediated intercellular transport Zm00001eb055920
GO:0001708
ISO
PLAZA Integrative Orthologycell fate specification AT4G08150
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT1G62360
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT4G08150
GO:0010094
ISO
PLAZA Integrative Orthologyspecification of carpel identity AT1G70510
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence Os03g0727000
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G70510
GO:0060777
ISO
PLAZA Integrative Orthologycompound leaf morphogenesis Solyc04g077210.3
GO:0045165
ISO
PLAZA Integrative Orthologycell fate commitment AT4G08150
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT4G08150
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0009691
ISO
PLAZA Integrative Orthologycytokinin biosynthetic process AT1G62360
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT1G62360
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT1G62360
GO:0009736
ISO
PLAZA Integrative Orthologycytokinin-activated signaling pathway AT1G70510
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT1G62360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G08150
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G62360
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding Zm00001eb055920
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb055920
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G08150
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os03g0727000
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity Os03g0727000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G62360
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G62360
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Zm00001eb055920
GO:0015630
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton Zm00001eb055920
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma Zm00001eb055920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR005540 KNOX1
IPR005539 ELK domain
IPR008422 Homeobox KN domain
IPR001356 Homeobox domain
IPR005541 KNOX2
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)