Gene: Pp3c20_19210

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_19210
  • Transcript Identifier Pp3c20_19210V3.2
  • Gene Type Coding gene
  • Location Chr20 : 12459363-12463631 : negative

Gene Family Information

  • ID HOM05D002499
  • #Genes/#Species 272/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_19210V3.2
  • pacid 32945200
  • alias Pp1s40_296V6
  • alias Phypa_162225
  • alias Phypa_180211
  • uniprot A0A7I4C039

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT2G42160
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D002499

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G42160
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G42160
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G26000
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G42160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT2G42160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR011422 BRCA1-associated 2
IPR001607 Zinc finger, UBP-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)