Gene: AT2G42160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G42160
  • Transcript Identifier AT2G42160.1
  • Gene Type Coding gene
  • Location Chr2 : 17574843-17577397 : negative

Gene Family Information

  • ID HOM05D002499
  • #Genes/#Species 272/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G42160.1
  • symbol BRIZ1
  • full_name BRAP2 RING ZnF UBP domain-containing protein 1
  • uniprot E5KGE0

Descriptions

  • Description zinc finger (ubiquitin-hydrolase) domain-containing protein
  • Computational description BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010029
IMP
IEA
Gene Ontologyregulation of seed germination1
GO:0010029
IEA
InterProregulation of seed germination
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
IEA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046982
IDA
Gene Ontologyprotein heterodimerization activity1
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IC, IEA
Gene Ontologyubiquitin ligase complex1
GO:0000151
IEA
InterProubiquitin ligase complex
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001607 Zinc finger, UBP-type
IPR011422 BRCA1-associated 2
IPR033273 RING domain containing protein BRIZ1/BRIZ2
Mapman id Description
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)