Gene: Pp3c20_1350

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_1350
  • Transcript Identifier Pp3c20_1350V3.2
  • Gene Type Coding gene
  • Location Chr20 : 694907-703003 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_1350V3.2
  • pacid 32947788
  • alias Phpat.020G007700
  • alias Pp1s152_6V6
  • uniprot A0A2K1ITL1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045910
IBA
GOA Databasenegative regulation of DNA recombination
GO:0000710
IBA
GOA Databasemeiotic mismatch repair
GO:0006298
IBA
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0006290
IBA
GOA Databasepyrimidine dimer repair
GO:0043570
IBA
GOA Databasemaintenance of DNA repeat elements
GO:0036297
IBA
GOA Databaseinterstrand cross-link repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G02070
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G02070
GO:0032143
IBA
GOA Databasesingle thymine insertion binding
GO:0032357
IBA
GOA Databaseoxidized purine DNA binding
GO:0032405
IBA
GOA DatabaseMutLalpha complex binding
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA
GO:0030983
IBA
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0000400
IBA
GOA Databasefour-way junction DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032300
IBA
GOA Databasemismatch repair complex
GO:0032301
IBA
GOA DatabaseMutSalpha complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036678 MutS, connector domain superfamily
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR002999 Tudor domain
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR007861 DNA mismatch repair protein MutS, clamp
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR017261 DNA mismatch repair protein MutS/MSH
IPR007696 DNA mismatch repair protein MutS, core
IPR045076 DNA mismatch repair MutS family
Mapman id Description
14.7.1.3 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH6