Gene: Pp3c1_5330
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_5330
- Transcript Identifier Pp3c1_5330V3.2
- Gene Type Coding gene
- Location Chr01 : 4015736-4017277 : negative
Gene Family Information
- ID HOM05D001727
- #Genes/#Species 375/99
- Phylogenetic origin
- ID ORTHO05D001758
- #Genes/#Species 359/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c1_5330V3.2
- pacid 32971818
- alias Phpat.001G021100
- alias Pp1s45_191V6
- alias Phypa_208285
- uniprot A9S3J2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G27850 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G05590 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IBA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G05590 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G05590 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G27850 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G05590 |
| GO:0015934 | ISO | PLAZA Integrative Orthology | large ribosomal subunit | AT3G05590 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G27850 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G27850 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G27850 |
| GO:0022625 | IBA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.18 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL18 |