Gene: Pp3c1_40410
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_40410
- Transcript Identifier Pp3c1_40410V3.1
- Gene Type Coding gene
- Location Chr01 : 28131979-28134920 : negative
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D001620
- #Genes/#Species 380/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c1_40410V3.1
- pacid 32972001
- alias Pp1s163_136V6
- alias Phpat.001G161600
- alias Phypa_168022
- uniprot A0A2K1LBN5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc03g052980.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003724 | IBA IEA | GOA Database | RNA helicase activity | |
| GO:0003724 | IEA | InterPro | RNA helicase activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G58510 |
| GO:0003723 | IBA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G58510 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G58510 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G42520 |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT3G58510 |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |