Gene: Pp3c1_24111

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c1_24111
Transcript Identifier Pp3c1_24111V3.2
Gene Type Coding gene
Location Chr01 : 17770399-17773977 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002417
#Genes/#Species 280/99
Phylogenetic origin

ID ORTHO05D002589
#Genes/#Species 277/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

name Pp3c1_24111V3.2
pacid 32966950
uniprot A9S9Z6

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006914	IEA	GOA Database	autophagy
GO:0006914	IEA	InterPro	autophagy
GO:0000045	IEA	GOA Database	autophagosome assembly
GO:0000045	IEA	InterPro	autophagosome assembly
GO:0034727	IBA	GOA Database	piecemeal microautophagy of the nucleus
GO:0034497	IBA	GOA Database	protein localization to phagophore assembly site
GO:0000423	IBA	GOA Database	mitophagy

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G49590

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1990316	IBA IEA	GOA Database	Atg1/ULK1 kinase complex
GO:1990316	IEA	InterPro	Atg1/ULK1 kinase complex
GO:0019898	IBA	GOA Database	extrinsic component of membrane
GO:0005829	IBA	GOA Database	cytosol
GO:0000407	IBA	GOA Database	phagophore assembly site
GO:0005776	ISO	PLAZA Integrative Orthology	autophagosome	AT3G49590

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036570	HORMA domain superfamily
IPR018731	Autophagy-related protein 13, N-terminal
IPR040182	Autophagy-related protein 13

Mapman id	Description
19.3.1.2	Protein homeostasis.autophagy.initiation complex.accessory component ATG13