Gene: Pp3c1_16170

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_16170
  • Transcript Identifier Pp3c1_16170V3.2
  • Gene Type Coding gene
  • Location Chr01 : 12166930-12167415 : negative

Gene Family Information

  • ID HOM05D001933
  • #Genes/#Species 342/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_16170V3.2
  • pacid 32969297
  • alias Pp1s63_123V6
  • alias Phypa_163991
  • alias Phpat.001G063100
  • uniprot A9SBP8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002181
IBA
GOA Databasecytoplasmic translation
GO:0048467
ISO
PLAZA Integrative Orthologygynoecium development AT3G53020
GO:0009955
ISO
PLAZA Integrative Orthologyadaxial/abaxial pattern specification AT3G53020
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT3G53020
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT3G53020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003735
IBA
GOA Databasestructural constituent of ribosome
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G36620
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G36620
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G36620
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G36620
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G36620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038630 Ribosomal protein L24e/L24 superfamily
IPR000988 Ribosomal protein L24e-related
IPR011017 TRASH domain
Mapman id Description
16.9.2.3 RNA processing.mRNA silencing.miRNA pathway.pri-miRNA recruitment factor (STV1)