Gene: Pp3c1_15500

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_15500
  • Transcript Identifier Pp3c1_15500V3.5
  • Gene Type Coding gene
  • Location Chr01 : 11568626-11569814 : negative

Gene Family Information

  • ID HOM05D000537
  • #Genes/#Species 1018/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_15500V3.5
  • pacid 32968878
  • alias Pp1s63_205V6
  • alias Phpat.001G060900
  • alias Phypa_77236
  • uniprot A9SBT8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0031047
IEA
InterProgene silencing by RNA
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT3G48670
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT3G12550
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G48670
GO:0010569
ISO
PLAZA Integrative Orthologyregulation of double-strand break repair via homologous recombination AT3G48670
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT3G48670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005381 Zinc finger-XS domain
IPR038588 XS domain superfamily
IPR005380 XS domain
Mapman id Description
12.5.1.4 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP)