Gene: Pp3c19_19770

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c19_19770
  • Transcript Identifier Pp3c19_19770V3.1
  • Gene Type Coding gene
  • Location Chr19 : 13171552-13172536 : positive

Gene Family Information

  • ID HOM05D004222
  • #Genes/#Species 168/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c19_19770V3.1
  • pacid 32939246
  • alias Phypa_53971
  • alias Pp1s519_2V6
  • alias Phpat.019G066800
  • uniprot A0A2K1IZ21

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0043966
IBA
GOA Databasehistone H3 acetylation
GO:0051123
IBA
GOA DatabaseRNA polymerase II preinitiation complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003713
IBA
GOA Databasetranscription coactivator activity
GO:0016251
IBA
GOA DatabaseRNA polymerase II general transcription initiation factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G54140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005669
IBA
GOA Databasetranscription factor TFIID complex
GO:0000124
IBA
GOA DatabaseSAGA complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003162 Transcription initiation factor TAFII31
IPR009072 Histone-fold
Mapman id Description
15.3.4.1.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF9