Gene: Pp3c19_19050
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c19_19050
- Transcript Identifier Pp3c19_19050V3.7
- Gene Type Coding gene
- Location Chr19 : 12648404-12649603 : positive
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c19_19050V3.7
- pacid 32939268
- alias Phypa_140773
- alias Phpat.019G064400
- alias Pp1s170_42V6
- uniprot A0A2K1IYZ1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009944 | ISO | PLAZA Integrative Orthology | polarity specification of adaxial/abaxial axis | AT5G02460 |
| GO:0010118 | ISO | PLAZA Integrative Orthology | stomatal movement | AT5G65590 |
| GO:0010497 | ISO | PLAZA Integrative Orthology | plasmodesmata-mediated intercellular transport | AT5G02460 |
| GO:0010372 | ISO | PLAZA Integrative Orthology | positive regulation of gibberellin biosynthetic process | AT2G46590 |
| GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT2G46590 |
| GO:0010052 | ISO | PLAZA Integrative Orthology | guard cell differentiation | AT5G65590 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G21050 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT3G55370 |
| GO:2000032 | ISO | PLAZA Integrative Orthology | regulation of secondary shoot formation | AT4G21030 |
| GO:1902066 | ISO | PLAZA Integrative Orthology | regulation of cell wall pectin metabolic process | AT5G65590 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT4G21030 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT3G61850 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | AT1G07640 |
| GO:0003002 | ISO | PLAZA Integrative Orthology | regionalization | AT1G07640 |
| GO:0048825 | ISO | PLAZA Integrative Orthology | cotyledon development | AT4G21030 |
| GO:0009639 | ISO | PLAZA Integrative Orthology | response to red or far red light | AT3G61850 |
| GO:0071462 | ISO | PLAZA Integrative Orthology | cellular response to water stimulus | AT2G46590 |
| GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT4G38000 |
| GO:0010067 | ISO | PLAZA Integrative Orthology | procambium histogenesis | AT5G62940 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT1G07640 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G60200 |
| GO:0010161 | ISO | PLAZA Integrative Orthology | red light signaling pathway | AT2G46590 |
| GO:0090057 | ISO | PLAZA Integrative Orthology | root radial pattern formation | AT5G02460 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G07640 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G07640 |
| GO:0048359 | ISO | PLAZA Integrative Orthology | mucilage metabolic process involved in seed coat development | AT4G21030 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT2G46590 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G60200 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT2G46590 |
| GO:0071491 | ISO | PLAZA Integrative Orthology | cellular response to red light | AT2G46590 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G61850 |
| GO:0010439 | ISO | PLAZA Integrative Orthology | regulation of glucosinolate biosynthetic process | AT1G07640 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G38000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G28510 |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT3G61850 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G38000 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G65590 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G61850 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G55370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G02460 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G28510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |