Gene: Pp3c16_6070
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c16_6070
- Transcript Identifier Pp3c16_6070V3.2
- Gene Type Coding gene
- Location Chr16 : 3961039-3963972 : positive
Gene Family Information
- ID HOM05D000688
- #Genes/#Species 832/100
- Phylogenetic origin
- ID ORTHO05D013343
- #Genes/#Species 18/1
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c16_6070V3.2
- pacid 32984060
- alias Phpat.016G022900
- uniprot A0A2K1J7D2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IBA IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032549 | IEA | GOA Database | ribonucleoside binding | |
| GO:0032549 | IEA | InterPro | ribonucleoside binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005665 | IBA | GOA Database | RNA polymerase II, core complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007641 | RNA polymerase Rpb2, domain 7 |
| IPR014724 | RNA polymerase Rpb2, OB-fold |
| IPR015712 | DNA-directed RNA polymerase, subunit 2 |
| IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily |
| IPR007646 | RNA polymerase Rpb2, domain 4 |
| IPR007645 | RNA polymerase Rpb2, domain 3 |
| IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |