Gene: Pp3c16_3760

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_3760
  • Transcript Identifier Pp3c16_3760V3.1
  • Gene Type Coding gene
  • Location Chr16 : 2457058-2458690 : positive

Gene Family Information

  • ID HOM05D001583
  • #Genes/#Species 405/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_3760V3.1
  • pacid 32983617
  • alias Pp1s127_74V6
  • alias Phypa_166897
  • alias Phpat.016G014500
  • uniprot A9RUL6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G53870
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G53870
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G31610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G35530
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G31610
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G31610
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G53870
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G53870
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31610
GO:0005634
IBA
GOA Databasenucleus
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004087 K Homology domain
IPR036419 Ribosomal protein S3, C-terminal domain superfamily
IPR015946 K homology domain-like, alpha/beta
IPR001351 Ribosomal protein S3, C-terminal
IPR004044 K Homology domain, type 2
IPR005703 Ribosomal protein S3, eukaryotic/archaeal
IPR009019 K homology domain superfamily, prokaryotic type
Mapman id Description
17.1.3.1.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS3