Gene: Pp3c16_1040

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_1040
  • Transcript Identifier Pp3c16_1040V3.1
  • Gene Type Coding gene
  • Location Chr16 : 666324-673412 : positive

Gene Family Information

  • ID HOM05D006439
  • #Genes/#Species 124/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_1040V3.1
  • pacid 32984649
  • alias Phypa_167390
  • alias Pp1s144_94V6
  • alias Phpat.016G004000
  • uniprot A0A2K1J6M0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IBA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G36370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IBA
GOA DatabaseSCF ubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR032675 Leucine-rich repeat domain superfamily
IPR000210 BTB/POZ domain
IPR011705 BTB/Kelch-associated
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
19.2.2.8.2.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (FBL)