Gene: Pp3c15_5200

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c15_5200
  • Transcript Identifier Pp3c15_5200V3.4
  • Gene Type Coding gene
  • Location Chr15 : 3283188-3284313 : positive

Gene Family Information

  • ID HOM05D000297
  • #Genes/#Species 1509/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c15_5200V3.4
  • pacid 32926746
  • alias Phypa_53068
  • alias Phpat.015G022000
  • alias Pp1s83_179V6
  • uniprot A0A0I9RJ58

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G21970
GO:0051512
ISO
PLAZA Integrative Orthologypositive regulation of unidimensional cell growth Os08g0174500
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT5G47640
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT3G53340
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G21970
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT1G21970
GO:0045723
ISO
PLAZA Integrative Orthologypositive regulation of fatty acid biosynthetic process AT1G21970
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc07g065500.2
GO:0040029
ISO
PLAZA Integrative Orthologyregulation of gene expression, epigenetic AT1G21970
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os08g0174500
GO:0009785
ISO
PLAZA Integrative Orthologyblue light signaling pathway AT1G21970
GO:0010262
ISO
PLAZA Integrative Orthologysomatic embryogenesis AT1G21970
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT5G47640
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14540
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT1G21970
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G38880
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001228
IEA
GOA DatabaseDNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001228
IEA
InterProDNA-binding transcription activator activity, RNA polymerase II-specific
GO:0043565
IEA
GOA Databasesequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os03g0413000
GO:0016602
IBA
IEA
GOA DatabaseCCAAT-binding factor complex
GO:0016602
IEA
InterProCCAAT-binding factor complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 Histone-fold
IPR027113 Transcription factor NFYB/HAP3
Mapman id Description
15.5.49.2 RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YB