Gene: Pp3c15_24240
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c15_24240
- Transcript Identifier Pp3c15_24240V3.1
- Gene Type Coding gene
- Location Chr15 : 15486298-15500389 : positive
Gene Family Information
- ID HOM05D000200
- #Genes/#Species 1958/100
- Phylogenetic origin
- ID ORTHO05D000262
- #Genes/#Species 1247/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c15_24240V3.1
- pacid 32928829
- alias Phypa_77678
- alias Phpat.015G092100
- alias Phypa_77677
- uniprot D6R267
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT1G08730 |
| GO:0051640 | ISO | PLAZA Integrative Orthology | organelle localization | AT1G08730 |
| GO:0009826 | ISO | PLAZA Integrative Orthology | unidimensional cell growth | AT5G20490 |
| GO:0048467 | ISO | PLAZA Integrative Orthology | gynoecium development | AT5G43900 |
| GO:0030048 | ISO | PLAZA Integrative Orthology | actin filament-based movement | AT4G28710 |
| GO:0051646 | ISO | PLAZA Integrative Orthology | mitochondrion localization | AT5G43900 |
| GO:0051645 | ISO | PLAZA Integrative Orthology | Golgi localization | AT5G43900 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT5G20490 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT5G20490 |
| GO:0060151 | ISO | PLAZA Integrative Orthology | peroxisome localization | AT5G43900 |
| GO:0048768 | ISO | PLAZA Integrative Orthology | root hair cell tip growth | AT5G20490 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT5G43900 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT5G20490 |
| GO:0010090 | ISO | PLAZA Integrative Orthology | trichome morphogenesis | AT5G43900 |
| GO:2000769 | ISO | PLAZA Integrative Orthology | regulation of establishment or maintenance of cell polarity regulating cell shape | AT4G33200 |
| GO:0007015 | IBA IEA | GOA Database | actin filament organization | |
| GO:0007015 | IEA | InterPro | actin filament organization | |
| GO:0030050 | IBA | GOA Database | vesicle transport along actin filament | |
| GO:0090436 | ISO | PLAZA Integrative Orthology | leaf pavement cell development | AT5G43900 |
| GO:0007097 | ISO | PLAZA Integrative Orthology | nuclear migration | AT4G33200 |
| GO:0009791 | ISO | PLAZA Integrative Orthology | post-embryonic development | AT5G20490 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030742 | ISO | PLAZA Integrative Orthology | GTP-dependent protein binding | AT5G43900 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G17580 |
| GO:0031267 | ISO | PLAZA Integrative Orthology | small GTPase binding | AT5G43900 |
| GO:0051015 | IBA | GOA Database | actin filament binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003774 | IEA | GOA Database | motor activity | |
| GO:0003774 | IEA | InterPro | motor activity | |
| GO:0003779 | IEA | GOA Database | actin binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005516 | IEA | GOA Database | calmodulin binding | |
| GO:0000146 | IBA | GOA Database | microfilament motor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G20490 |
| GO:0035619 | ISO | PLAZA Integrative Orthology | root hair tip | AT5G20490 |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT5G43900 |
| GO:0031965 | ISO | PLAZA Integrative Orthology | nuclear membrane | AT4G33200 |
| GO:0030133 | ISO | PLAZA Integrative Orthology | transport vesicle | AT5G20490 |
| GO:0016459 | IEA | GOA Database | myosin complex | |
| GO:0016459 | IEA | InterPro | myosin complex | |
| GO:0031982 | IBA | GOA Database | vesicle | |
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0015629 | IBA | GOA Database | actin cytoskeleton | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G58160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001609 | Myosin head, motor domain |
| IPR002710 | Dilute domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR004009 | Myosin, N-terminal, SH3-like |
| IPR037975 | Class XI myosin, cargo binding domain |
| IPR036018 | Plant myosin, class XI, motor domain |
| IPR000048 | IQ motif, EF-hand binding site |
| IPR036961 | Kinesin motor domain superfamily |
| Mapman id | Description |
|---|---|
| 20.2.4.1 | Cytoskeleton organisation.microfilament network.myosin microfilament-based motor protein activities.class XI myosin |