Gene: AT5G20490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20490
  • Transcript Identifier AT5G20490.2
  • Gene Type Coding gene
  • Location Chr5 : 6927064-6937380 : negative

Gene Family Information

  • ID HOM05D000200
  • #Genes/#Species 1958/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20490.2
  • symbol XIK
  • uniprot F4K5J1

Descriptions

  • Description myosin family protein with Dil
  • Computational description XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 40570 Blast hits to 26875 proteins in 2480 species: Archae - 466; Bacteria - 5527; Metazoa - 21427; Fungi - 3168; Plants - 2202; Viruses - 135; Other Eukaryotes - 7645 (source: NCBI BLink).
  • Computational description XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007015
IBA
IEA
Gene Ontologyactin filament organization1
GO:0007015
IEA
InterProactin filament organization
GO:0030050
IBA
Gene Ontologyvesicle transport along actin filament1
GO:0048767
IMP
Gene Ontologyroot hair elongation2
GO:0009826
IGI
Gene Ontologyunidimensional cell growth3
GO:0030048
TAS
Gene Ontologyactin filament-based movement4
GO:0010090
IMP, IGI
Gene Ontologytrichome morphogenesis5 6
GO:0010091
IMP
Gene Ontologytrichome branching5
GO:0048768
IMP
Gene Ontologyroot hair cell tip growth5
GO:0051645
IMP
Gene OntologyGolgi localization7
GO:0051646
IMP
Gene Ontologymitochondrion localization7
GO:0060151
IMP
Gene Ontologyperoxisome localization7
GO:0009791
IGI
Gene Ontologypost-embryonic development3
GO:0010154
IGI
Gene Ontologyfruit development3
GO:0051301
IGI
Gene Ontologycell division3
GO:0048467
IGI
Gene Ontologygynoecium development6
GO:0090436
IGI
Gene Ontologyleaf pavement cell development6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
GOA Databaseactin binding
GO:0000146
IBA
Gene Ontologymicrofilament motor activity1
GO:0051015
IBA
Gene Ontologyactin filament binding1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0003774
IEA
GOA Databasemotor activity
GO:0003774
ISS
Gene Ontologymotor activity4
GO:0003774
IEA
InterPromotor activity
GO:0005515
IPI
Gene Ontologyprotein binding8
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015629
IBA
Gene Ontologyactin cytoskeleton1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0031982
IBA
Gene Ontologyvesicle1
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma9
GO:0016459
IEA
GOA Databasemyosin complex
GO:0016459
IEA
InterPromyosin complex
GO:0030133
IDA
Gene Ontologytransport vesicle8
GO:0035619
IDA
Gene Ontologyroot hair tip2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001609 Myosin head, motor domain
IPR036018 Plant myosin, class XI, motor domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004009 Myosin, N-terminal, SH3-like
IPR000048 IQ motif, EF-hand binding site
IPR036961 Kinesin motor domain superfamily
IPR002710 Dilute domain
IPR037975 Class XI myosin, cargo binding domain
Mapman id Description
20.2.4.1 Cytoskeleton organisation.microfilament network.myosin microfilament-based motor protein activities.class XI myosin