Gene: Pp3c12_9550

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_9550
  • Transcript Identifier Pp3c12_9550V3.4
  • Gene Type Coding gene
  • Location Chr12 : 6569357-6571940 : positive

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_9550V3.4
  • pacid 32972595
  • alias Phpat.012G033700
  • alias Pp1s91_88V6
  • alias Phypa_213630
  • uniprot A9SLJ8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016574
IBA
GOA Databasehistone ubiquitination
GO:0033523
ISO
PLAZA Integrative Orthologyhistone H2B ubiquitination AT2G02760
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G02760
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT1G14400
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT1G14400
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G02760
GO:0009650
ISO
PLAZA Integrative OrthologyUV protection AT2G02760
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G02760
GO:0005524
IEA
GOA DatabaseATP binding
GO:0061631
IBA
GOA Databaseubiquitin conjugating enzyme activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G02760
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000608 Ubiquitin-conjugating enzyme E2
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Mapman id Description
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)